API#

Import SpaMetric as:

import SpaMetric as spm

spatial_reconstruction(adata[, alpha, ...])

Spatial reconstruction of gene expression matrix.

metric_learning(adata[, beta, tol_err, ...])

Metric learning for spatial transcriptomics.

reference_centers(adata, n_centers[, ...])

Select reference centers for mini-batch metric learning.

metric_learning_minibatch(adata[, beta, ...])

Mini-batch metric learning for large-scale spatial transcriptomics.